Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943300.1_cds_XP_016486501.1_77338
CDS Infomation

[gene=LOC107806781] [db_xref=GeneID:107806781] [protein=putative E3 ubiquitin-protein ligase XBAT31] [protein_id=XP_016486501.1] [location=complement(join(18007..18402,18706..18964,19095..19202,19354..19494,19694..19815,19928..19999,20148..20207,20303..20482))] [gbkey=CDS]
Sequence

ATGGGTCAGGGGTTGAGTTGTGGATCAGGTGATGAACATGGCTTATTTACTGCTGTTCAG
TGTGGTGATGTGGAGACATTAAAAGCTGTTTTAGAGAAAAACCCATCTCTAATTCATCAT
TCTACAGTGTATGATCGCCAGTCAGCTTTGCATATTGCTGCTGCTAATGGTCAGATCGAG
GTTGTTACTATGCTGTTAAACCAATCTGTCAACCCGGATTTGTTAAATCGCTATAAGCAG
ACTCCATTGATGCTAGCAGCAATGCACGGGAAGATCTCTTGTGTGCAAAAGCTTATTGAA
GCAGGAGCTAATATTTTGAAGTTTGATTCGCTAAATGGAAGAACATGTTTGCACTATGCT
GCTTACTATGGTCACTCTGAGTGCCTTAAAGCAATTCTTTCTGCGGCTCGCACGTCTCAT
GTTGCAGCATCTTGGGGATATGCCCGGTTTGTGAATGTTAGAGATGGGAAAGGAGCAACA
CCTTTGCACTTAGCAGCTCGTCAAAGACGGCCTGAATGTGTTCACATTTTACTGGACAAT
GGCGCTTTGGTTTGCGCTTCAACTGGTGGATATGGATTTCCAGGTAGCACTCCACTTCAT
TTGGCTGCAAGAGGTGGTTCTCTTGATTGCATCCGCGAATTATTGGCGTGGGGAGCAGAT
CGACTACACAGAGATGCCTCGGGGAGAATACCGTACACGGTTGCTTTAAGGTACCACCAC
GGTGCATGTGCGGCTTTATTGAATCCTTCATCAGCAGAGCCTCTCGTGTGGCCATCGCCG
TTGAAGTTCATCAGTCAGCTCAATGAAGAGGCGAAGGCTCTCCTCGAACATGCCTTAATG
GAAGCAAATAAGGAGAGGGAAAAGAATATCCTAAAGGGGACAGATTACTCGCCACCGTCC
CCTACTCAATCTGATGCAGGGATGGATGATAACATCTCTGAGGTCAGTGATACAGAAGTA
TGTTGTATATGTTTCGATCAATTATGCACAATTGAAGTCCAGGACTGTGGGCACCAAATG
TGTGCACATTGCGTACTTGCCTTATGCTGCCACAACAAGCCAAATCCGACCACGACTAGT
CCTCCGGAACCAGTGTGCCCCTTCTGCAGAAGCAACATTGTACAATTACATGTTATCAAG
GTTACAAAGGACGACGGCATAGACCGTGATATCTCCTCAAAGCTTCGAAAGTCTAGGAGA
TCACGAAACTTCAGCGAGGGCAGTAGTAGTTTTAAGGGCTTATCAGCAGTAAGTTCTTTT
GGCATAATGACTGGCCGTGGCTCGGGTAGGATCGCTGCTGAAAACGAATGGATCGATAAG
CCATTAAGCGTTGATTGA

Peptide Sequence

PEP ID

XP_016486501.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tabacum]
Sequence

MGQGLSCGSGDEHGLFTAVQCGDVETLKAVLEKNPSLIHHSTVYDRQSALHIAAANGQIE
VVTMLLNQSVNPDLLNRYKQTPLMLAAMHGKISCVQKLIEAGANILKFDSLNGRTCLHYA
AYYGHSECLKAILSAARTSHVAASWGYARFVNVRDGKGATPLHLAARQRRPECVHILLDN
GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLHRDASGRIPYTVALRYHH
GACAALLNPSSAEPLVWPSPLKFISQLNEEAKALLEHALMEANKEREKNILKGTDYSPPS
PTQSDAGMDDNISEVSDTEVCCICFDQLCTIEVQDCGHQMCAHCVLALCCHNKPNPTTTS
PPEPVCPFCRSNIVQLHVIKVTKDDGIDRDISSKLRKSRRSRNFSEGSSSFKGLSAVSSF
GIMTGRGSGRIAAENEWIDKPLSVD

Transcript Sequence

Gene sequence data has not been registered.